clear all; close all; clc

load('OSCAHR_CS_Cyto_Abundances.mat'-)
load('MyColormapsSST','mycmap')

LON=LON_Cyto;
LAT=LAT_Cyto;

%%%%from Girault et al Biogeosc.2013
coeff_Prochlro=49;%[fg C cell^-1]
coeff_Syneco=250; %[fg C cell^-1]
coeff_Pico=671;
coeff_Nano=3498;
coeff_Micro=NaN; %%tres variable par espece
coeff_Crypto=NaN; %%to be defined

% % All
 North = 44.5;
 South = 42.5;
 East = 9.5;
 West = 6;

% %Leg1
% North1 = 44;
% South1 = 43;
% East1 = 8;
% West1 = 6;

%Leg2
North2 = 44.25;
South2 = 43.25;
East2 = 9.5;
West2 = 8;

%All
% %Synecho
% fig=figure(1)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,SynechococcusNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([15000 50000])
% title('Synechococcus')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Synecho');
% 
% %Prochloro
% fig=figure(2)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,ProchlorococcusNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([10000 60000])
% title('Prochlorococcus')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Prochloro');
% 
% %Cryptophytes
% fig=figure(3)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,Cryptophytes_likeNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([20 120])
% title('Cryptophyte Like')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Crypto');
% 
% %Pico
% fig=figure(4)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,PicoNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([600 1700])
% title('Picoeukaryotes')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Pico');
% 
% %Pico high FLR
% fig=figure(5)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,picohighFLRNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([50 250])
% title('Picoeukaryotes High FLR')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_PicoHighFLR');
% 
% %Pico T
% fig=figure(6)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,PicoTotalNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([600 1800])
% title('Picoeukaryotes Total')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_PicoTotal');
% 
% %Nano
% fig=figure(7)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,NanoNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([600 1200])
% title('Nanoeukaryotes')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Nano');
% 
% %Nano high FLO
% fig=figure(8)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,NanohighFLONmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([0 100])
% title('Nanoeukaryotes High FLO')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_NanoHighFLO');
% 
% %Nano T
% fig=figure(9)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,NanoTotalNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([600 1200])
% title('Nanoeukaryotes Total')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_NanoTotal');
% 
% %Micro
% fig=figure(10)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,MicroNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([10 40])
% title('Microeukaryotes')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Micro');
% 
% %MicroHighFLO
% fig=figure(11)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,MicrohighFLONmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([0 15])
% title('Microeukaryotes High FLO')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_MicroHighFLO');
% 
% %Micro T
% fig=figure(12)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,MicroTotalNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([10 40])
% title('Microeukaryotes Total')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_MicroTotal');
% 
% %Unidentified
% fig=figure(13)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West  East],'lat',[South North]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,Unidentified_flr5NmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([1000 5000])
% title('Unidentified')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Unidentified');


%LEG1

%Synecho
% fig=figure(1)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,SynechococcusNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([15000 50000])
% title('Synechococcus')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Synecho_LEG1');
% 
% %Prochloro
% fig=figure(2)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,ProchlorococcusNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([10000 60000])
% title('Prochlorococcus')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Prochloro_LEG1');
% 
% %Cryptophytes
% fig=figure(3)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,Cryptophytes_likeNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([20 120])
% title('Cryptophyte Like')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Crypto_LEG1');
% 
% %Pico
% fig=figure(4)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,PicoNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([600 1700])
% title('Picoeukaryotes')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Pico_LEG1');
% 
% %Pico high FLR
% fig=figure(5)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,picohighFLRNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([50 250])
% title('Picoeukaryotes High FLR')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_PicoHighFLR_LEG1');
% 
% %Pico T
% fig=figure(6)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,PicoTotalNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([600 1800])
% title('Picoeukaryotes Total')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_PicoTotal_LEG1');
% 
% %Nano
% fig=figure(7)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,NanoNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([600 1200])
% title('Nanoeukaryotes')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Nano_LEG1');
% 
% %Nano high FLO
% fig=figure(8)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,NanohighFLONmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([0 100])
% title('Nanoeukaryotes High FLO')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_NanoHighFLO_LEG1');
% 
% %Nano T
% fig=figure(9)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,NanoTotalNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([600 1200])
% title('Nanoeukaryotes Total')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_NanoTotal_LEG1');
% 
% %Micro
% fig=figure(10)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,MicroNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([10 40])
% title('Microeukaryotes')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_Micro_LEG1');
% 
% %MicroHighFLO
% fig=figure(11)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,MicrohighFLONmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([0 15])
% title('Microeukaryotes High FLO')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_MicroHighFLO_LEG1');
% 
% %Micro T
% fig=figure(12)
% set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
% m_proj('Equidistant Cylindrical','lon',[West1  East1],'lat',[South1 North1]);%set up our projection and bourndaries.
% hold on;
% m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
% m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
% m_scatter(LON,LAT,50,MicroTotalNmL,'fill');
% set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
% cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
% set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
% caxis([10 40])
% title('Microeukaryotes Total')
% hold off;
% print(gcf,'-dpng','OSCAHR_CS_MicroTotal_LEG1');
% 
%LEG2

%Synecho
fig=figure(1);
set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
m_proj('Equidistant Cylindrical','lon',[West2  East2],'lat',[South2 North2]);%set up our projection and bourndaries.
hold on;
m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
m_scatter(LON,LAT,50,SynechococcusNmL,'fill');
set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
caxis([15000 50000])
title('Synechococcus')
hold off;
print(gcf,'-dpng','OSCAHR_CS_Synecho_LEG2');

%Prochloro
fig=figure(2);
set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
m_proj('Equidistant Cylindrical','lon',[West2  East2],'lat',[South2 North2]);%set up our projection and bourndaries.
hold on;
m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
m_scatter(LON,LAT,50,ProchlorococcusNmL,'fill');
set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
caxis([10000 60000])
title('Prochlorococcus')
hold off;
print(gcf,'-dpng','OSCAHR_CS_Prochloro_LEG2');

%Cryptophytes
fig=figure(3);
set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
m_proj('Equidistant Cylindrical','lon',[West2  East2],'lat',[South2 North2]);%set up our projection and bourndaries.
hold on;
m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
m_scatter(LON,LAT,50,Cryptophytes_likeNmL,'fill');
set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
caxis([20 120])
title('Cryptophyte Like')
hold off;
print(gcf,'-dpng','OSCAHR_CS_Crypto_LEG2');

%Pico T
fig=figure(6);
set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
m_proj('Equidistant Cylindrical','lon',[West2  East2],'lat',[South2 North2]);%set up our projection and bourndaries.
hold on;
m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
m_scatter(LON,LAT,50,PicoTotalNmL,'fill');
set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
caxis([600 1800])
title('Picoeukaryotes Total')
hold off;
print(gcf,'-dpng','OSCAHR_CS_PicoTotal_LEG2');


%Nano T
fig=figure(9);
set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
m_proj('Equidistant Cylindrical','lon',[West2  East2],'lat',[South2 North2]);%set up our projection and bourndaries.
hold on;
m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
m_scatter(LON,LAT,50,NanoTotalNmL,'fill');
set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
caxis([600 1200])
title('Nanoeukaryotes Total')
hold off;
print(gcf,'-dpng','OSCAHR_CS_NanoTotal_LEG2');

%Micro T
fig=figure(12);
set(gca,'FontSize',15,'FontName','Arial');hold on %Set font type and size.
m_proj('Equidistant Cylindrical','lon',[West2  East2],'lat',[South2 North2]);%set up our projection and bourndaries.
hold on;
m_gshhs_h('patch',[.5 .5 .5],'edgecolor','k');%Set up our coastlines and continents.
m_grid('box','fancy','tickdir','in','fontsize',20);%Set up our fancy box.
m_scatter(LON,LAT,50,MicroTotalNmL,'fill');
set(fig,'Colormap',mycmap) %Choice of the colorbar (personal)
cbar1 = colorbar('location','EastOutside','FontSize',15);%position and fontsize of our colour bar.
set(get(cbar1 ,'ylabel'),'String', 'Abundance (N/mL)','Rotation',90,'FontSize',15);% font and name on our colourbar.
caxis([10 40])
title('Microeukaryotes Total')
hold off;
print(gcf,'-dpng','OSCAHR_CS_MicroTotal_LEG2');

close all
